Xinjiang Agricultural Sciences ›› 2021, Vol. 58 ›› Issue (4): 589-598.DOI: 10.6048/j.issn.1001-4330.2021.04.001
• Crop Genetics and Breeding·Germplasm Resources·Molecular Genetics·Cultivation Physiology • Next Articles
HE Chenchen, LIU Lijun, LU Xiaoyan
Received:
2020-03-05
Online:
2021-04-20
Published:
2021-04-25
Correspondence author:
LU Xiaoyan(1970-), female, professor, PhD, Research Direction: Horticulture and pomology, (E-mail)lxyshz@126.com
Supported by:
何晨晨, 刘俐君, 鲁晓燕
通讯作者:
鲁晓燕(1970-),女,新疆人,教授,博士,博士生导师,研究方向为园艺果树学,(E-mail)lxyshz@126.com
作者简介:
何晨晨(1995-),女,河南人,硕士研究生,研究方向为园艺果树学,(E-mail)1660038110@qq.com
基金资助:
CLC Number:
HE Chenchen, LIU Lijun, LU Xiaoyan. Selection of miRNAs and Target Genes in Leaves of Malus sieversii under NaCl Stress[J]. Xinjiang Agricultural Sciences, 2021, 58(4): 589-598.
何晨晨, 刘俐君, 鲁晓燕. 新疆野苹果幼苗叶片响应NaCl胁迫的miRNAs及靶基因筛选[J]. 新疆农业科学, 2021, 58(4): 589-598.
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URL: http://www.xjnykx.com/EN/10.6048/j.issn.1001-4330.2021.04.001
[1] | Ambros, V. Micrornas: tiny regulators with great potential [J]. Cell, 2001, 107(7): 823-826. |
[2] | Gielen, H., Remans, T., Vangronsveld, J., & Cuypers, A. Micrornas in metal stress: specific roles or secondary responses[J]. International Journal of Molecular Sciences, 2012, 13(12): 15,826-15,847. |
[3] | 侍婷,高志红,章镇,等.MicroRNA参与植物花发育调控的研究进展[J].中国农学通报,2010,26(13):267-271.SHI Ting, GAO Zhihong, ZHANG Zhen, et al. Advances in studies on the role of Microrna in the regulation of plant flower development [J]. Chinese Agricultural Bulletin, 2010, 26(13): 267-271. |
[4] | Ma, J.,Guo, T. L.,Wang, Q. L.,Wang, K. B.,Sun, R. B.,& Zhang, B. H . Expression profiles of miRNAs in Gossypium raimondii [J]. Journal of Zhejiang University, 2015,16(4): 296-303. |
[5] | 刘晓威,杨秀艳,刘正祥,等.MicroRNA在植物抵御盐胁迫过程中的作用[J].生物技术通报,2017,33(12):12-21.LIU Xiaowei, YANG Xiuyan, LIU Zhengxiang, et al. Role of Microrna in plant resistance to salt stress [J]. Biotechnology Bulletin, 2017, 33(12): 12-21. |
[6] | 李育农.苹果属植物种质资源研究[M].北京:中国农业出版社,2001,20-134.LI Yunong. Germplasm resources of apple plants [M].Beijing: China Agriculture Press, 2001: 20-134. |
[7] | 阎国荣,许正.中国新疆野生果树研究[M].北京:中国林业出版社,2010:62-114.YAN Guorong, XU Zheng. Study on wild fruit trees in Xinjiang, China [M].Beijing: China Forestry Press, 2010:62-114. |
[8] | 王磊.新疆野苹果和新疆野杏[J].新疆农业科学,1989,(6):33-34.WANG Lei. Malus sieversii and Armeniaca vulgaris Lam [J]. Xinjiang Agricultural Sciences, 1989, (6): 33-34. |
[9] | 尹蓉.苹果属植物幼苗对盐胁迫的耐性评价及生理响应[D]. 杨凌:西北农林科技大学,2010.YIN Rong. Assessment of tolerance and physiological response to salt stress in young plants of the genus malus [D]. Yangling: Northwest A & F University, 2010. |
[10] | 于玮玮,曹波,龙鸿,等.新疆野苹果幼苗对盐胁迫的生理响应[J].华北农学报,2016,31(1):170 -174.YU Weiwei, CAO Bo, LONG Hong, et al. Physiological response of wild apple seedlings to salt stress in xinjiang [J]. Journal of north China agriculture, 2016, 31(1): 170-174. |
[11] | Xu, Q., Liu, Y., Zhu, A., Wu, X., Ye, J., & Yu, K., et al. Discovery and comparative profiling of micrornas in a sweet orange red-flesh mutant and its wild type[J]. BMC Genomics, 2010, 11(1):246. |
[12] | Pantaleo, V., Szittya, G., Moxon, S., Miozzi, L., & Burgyan, J. Identification of grapevine micrornas and their targets using high-throughput sequencing and degradome analysis [J]. The Plant Journal, 2010, 62(6): 960-976. |
[13] | 王永江,李中安,张振臣,等.利用 Solexa 测序技术鉴定甜橙 mi RNAs[J].果树学报,2013,(30):526-536.WANG Yongjiang, LI Zhongan, ZHANG Zhenchen, et al. Identification of sweet orange mi RNAs by Solexa sequencing technology [J]. Journal of Fruit Science, 2013,(30): 526-536. |
[14] | Niu, Q., Li, J., Cai, D., Qian, M., Jia, H., & Bai, S., et al. Dormancy-associated mads-box genes and micrornas jointly control dormancy transition in pear (\r, pyrus pyrifolia\r, white pear group) flower bud [J]. Journal of Experimental Botany, 2015,67(1): 239-257. |
[15] | Sun, L.M., Li, W.Y., Guo, W. W., et al. Identification and comparative profiling of mirnas in an early flowering mutant of trifoliate orange and its wild type by genome-wide deep sequencing [J]. Plos One, 2012, 7(8): e43760. |
[16] | 吕新民. NaCl处理对酸枣苗AsA-GSH循环的影响与miRNA靶基因降解组分析[D].石河子:石河子大学,2017.LÜ Xinmin. Effects of NaCl Stress on As A-GSH cycle and the MicroRNA Targets degradome analysis involved in Sour Jujube Seedlings [D]. Shihezi: Shihezi University, 2017. |
[17] | 曲东. miR168启动子功能特异性解析及microRNA在苹果果皮着色过程中的功能研究[D].杨凌:西北农林科技大学,2016.QU Dong. Functional specificity analysis of miR168 promoter and function study of microRNA in apple peel coloring process [D]. Yangling: Northwest A & F University, 2016. |
[18] | 周兰,张利义,张彩霞,等.苹果实时荧光定量PCR分析中内参基因的筛选[J].果树学报,2012,29(6):965-970.ZHOU Lan, ZHANG Liyi, ZAHNG Caixia, et al. Screening of internal reference genes in real-time fluorescent quantitative PCR analysis of apple [J]. Journal of Fruit Science, 2012, 29(6):965-970. |
[19] | 唐永凯,贾永义.荧光定量 PCR数据处理方法的探讨[J].生物技术,2008, (3):89-91.TANG Yongkai, JIA Yongyi. Discussion on the processing method of quantitative fluorescent PCR data [J]. Biotechnology, 2008,(3):89-91. |
[20] | Lee, R. C., Feinbaum, R. L., & Ambros, V. The c. elegans heterochronic gene lin-4 encodes small rnas with antisense complementarity to lin-14[J]. Cell, 1993, 75(5): 843. |
[21] | Sunkar, R., Zhu, J. K. Novel and stress-regulated micrornas and other small rnas from Arabidopsis [J]. The Plant Cell Online, 2004, 16(8): 2,001-2,019. |
[22] | Zhang, B. H., Pan, X. P. Identification of 188 conserved maize micrornas and their targets [J]. FEBS Letters, 2006, 580(15): 3,753-3,762. |
[23] | 杨静,宋江华.植物花粉发育miRNAs研究进展[J].中国细胞生物学学报, 2014,(9) : 1317-1322.YANG Jing, SONG Jianghua. Research progress on miRNAs in plant pollen development [J]. Chinese Journal of Cell Biology, 2014,(9): 1317-1322. |
[24] | Jian, X., Zhang, L., Li, G., Zhang, L., Wang, X., & Cao, X., et al. Identification of novel stress-regulated micrornas from oryza sativa l [J]. Genomics, 2010, 95(1): 47-55. |
[25] | Gleave, A. P., Ampomah-Dwamena, C., Berthold, S., Dejnoprat, S., Karunairetnam, S., & Nain, B., et al. Identification and characterisation of primary micrornas from apple (malus domesticacv. royal gala) expressed sequence tags [J]. Tree Genetics & Genomes, 2008,4(2): 343-358. |
[26] | Yu, H., Song, C., Jia, Q., Wang, C., Li, F., & Nicholas, K. K., et al. Computational identification of micrornas in apple expressed sequence tags and validation of their precise sequences by mir-race [J]. Physiologia Plantarum, 2011, 141(1): 56-70. |
[27] | Song, C., Fang, J., Li, X., Liu, H., & Chao, C. T. Identification and characterization of 27 conserved micrornas in citrus [J]. Planta, 2009,30(4):671-685. |
[28] | Wu, X. M., Liu, M. Y., Ge, X. X., Xu, Q., & Guo, W. W. Stage and tissue-specific modulation of ten conserved mirnas and their targets during somatic embryogenesis of valencia sweet orange [J]. Planta, 2011,233(3): 495-505. |
[29] | Ge, A. J., Shang, L. F., Zhang, X. Deep sequencing discovery of novel and conserved micrornas in strawberry (fragaria×ananassa)[J]. Physiologia Plantarum, 2013,148(3): 387-396. |
[30] | Wang, C., Wang, X. C., Kibet, N. K., Song, C. N., Zhang, C.Q., & Li, X. Y. Deep sequencing of grapevine flower and berry short rna library for discovery of novel micrornas and validation of precise sequences of grapevine micrornas deposited in mirbase [J]. Physiologia Plantarum, 2011, (143):64-81. |
[31] | Wang, C., Han, J., Liu, C., Kibet, K., Kayesh, E., & Shangguan, L., et al. Identification of micrornas from amur grape (vitis amurensis rupr.) by deep sequencing and analysis of microrna variations with bioinformatics[J]. BMC Genomics, 2012, 13(1): 122. |
[32] | Gao, Z., Luo, X., Shi, T., Cai, B., Zhang, Z., & Cheng, Z., et al. Identification and validation of potential conserved micrornas and their targets in peach (prunus persica)[J]. Molecules and Cells, 2012, 34(3): 239-249. |
[33] | Phillips, J. R., Dalmay, T., & Bartels, D. The role of small RNAs in abiotic stress [J]. FEBS Letters, 2007, 581(19):3592-3597. |
[34] | Kong, Y. Q., Elling, A. A., Chen, B. B., & Deng, X. W. Differential expression of micrornas in maize inbred and hybrid lines during salt and drought stress [J]. American Journal of Plant Sciences, 2010, 1(2): 69-76. |
[35] | Lu, C., Tej, S. S., Luo, S., Haudenschild, C. D., & Green, P. J. Elucidation of the small rna component of the transcriptome[J]. Science, 2005, 309(5740): 1567-1569. |
[36] | Ping, W., Yue, W., Cheng-Chen, L., Li-Wei, L., Fang-Fang, M., & Xiao-Yi, W., et al. Identification of arbuscular mycorrhiza (am)-responsive micrornas in tomato [J]. Frontiers in Plant Science, 2016, (7): 429. |
[37] | 卢晓慧, 朱志明, 岳俊阳. 藏红花柱头小RNA高通量测序及生物信息学分析[J]. 植物生理学报, 2018, 54(5): 827-836.LU Xiaohui, ZH Zhiming, YUE Junyang. High-throughput sequencing and bioinformatics analysis of small RNA in stigma of saffron [J]. Plant Physiology Journal, 2018, 54(5): 827-836. |
[38] | 刘传发. N-glvcan成熟的生物学功能研究[D].南京:南京大学,2016.LIU Chuanfa. Study on biological functions of N-glvcan maturation [D]. Nanjing: Nanjing University, 2016. |
[39] | 冯克伟. 野生二粒小麦优异耐盐种质的鉴定及其相关基因的发掘[D].杨凌:西北农林科技大学,2018.FENG Kewei. Identification of excellent salt-tolerant germplasm of wild emmer wheat and discovery of related genes [D]. Yangling: Northwest A&F University, 2018. |
[40] | Jia, X., Wang, W. X., Ren, L., Chen, Q. J., Mendu, V., & Willcut, B., et al. Differential and dynamic regulation of mir398 in response to aba and salt stress in Populus tremula and Arabidopsis thaliana [J]. Plant Molecular Biology, 2016, 71(1-2): 51-59. |
[41] | Chen, Q. S., Li, M., Zhang, Z.C., Tie, W.W., Chen, X., & Jin, L.F. Integrated mrna and microrna analysis identifies genes and small mirna molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco[J]. BMC Genomics, 2017, 18(1): 62. |
[42] | Liu, H. H., Tian, X., Li, Y. J., Wu, C. A., & Zheng, C. C. Microarray-based analysis of stress-regulated micrornas in Arabidopsis thaliana[J]. RNA, 2018, 14(5): 836-843. |
[43] | Patade, V. Y., & Suprasanna, P. Short-term salt and peg stresses regulate expression of microrna,mir159in sugarcane leaves[J]. Journal of Crop Science and Biotechnology, 2010, 13(3): 177-182. |
[44] | Ding D., Zhang L., Wang H., Liu Z., Zhang Z., and Zheng Y. Differential expression of miRNAs in response to saltstress in maize roots[J]. Annals of Botany, 2018,103(1): 29-38. |
[45] | Wu, P., Han, S., Zhao, W., Chen, T., Zhou, J., & Li, L. Genome-wide identification of abiotic stress-regulated and novel micrornas in mulberry leaf [J]. Plant Physiology and Biochemistry, 2015,(95): 75-82. |
[46] | Sun, Z., Wang, Y., Mou, F. Genome-wide small RNA analysis of soybean reveals auxin-responsive microRNAs that are differentially expressed in response to salt stress in root apex [J]. Front Plant Sci, 2016, (6):1273. |
[47] | Tian, F., Xiumei, L., Wu, Y., Kuaifei, X., Jie, O., & Mingyong, Z., et al. Rice osa-mir171c mediates phase change from vegetative to reproductive development and shoot apical meristem maintenance by repressing four osham transcription factors[J]. Plos One, 2015, 10(5): e0125833. |
[48] | Ma, Z., Hu, X., Cai, W., Huang, W., Zhou, X., & Luo, Q., et al. Arabidopsis mir171-targeted scarecrow-like proteins bind to gt cis-elements and mediate gibberellin-regulated chlorophyll biosynthesis under light conditions [J]. Plos Genetics, 2014, 10(8): e1004519. |
[49] | Curaba, J., Talbot, M., Li, Z., & Helliwell, C. Over-expression of microrna171 affects phase transitions and floral meristem determinancy in barley [J]. BMC Plant Biology, 2013, 13(1):1-10. |
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