新疆农业科学 ›› 2023, Vol. 60 ›› Issue (6): 1372-1378.DOI: 10.6048/j.issn.1001-4330.2023.06.009
• 种质资源·耕作栽培·生理生化·土壤肥料·分子遗传学 • 上一篇 下一篇
邵盘霞(), 赵准, 邵武奎, 郝晓燕, 高升旗, 李建平, 胡文冉, 黄全生()
收稿日期:
2022-11-10
出版日期:
2023-06-20
发布日期:
2023-06-20
通信作者:
黄全生(1964-),男,新疆乌鲁木齐人,研究员,博士(后),研究方向为作物抗逆分子生物学,(E-mail) hquansheng@126.com
作者简介:
邵盘霞(1996-),女,新疆乌鲁木齐人,研究方向为玉米抗逆分子生物学及新种质创制, (E-mail) 2655738862@qq.com
基金资助:
SHAO Panxia(), ZHAO Zhun, SHAO Wukui, HAO Xiaoyan, GAO Shengqi, LI Jianping, HU Wenran, HUANG Quansheng()
Received:
2022-11-10
Online:
2023-06-20
Published:
2023-06-20
Correspondence author:
HUANG Quansheng (1964-), male, Urumqi, researcher, doctor, research direction: molecular biology of crop resistance, (E-mail) hquansheng@126.com
Supported by:
摘要:
【目的】研究玉米ZmCDPK22基因的功能特征,分析该基因的编码序列,分析物种间的进化关系及蛋白互作及其功能,以叶片含水量作为干旱胁迫指标,研究ZmCDPK22在干旱胁迫下的表达特性。【方法】利用生物信息学手段分析该基因的基本特征,运用实时荧光定量(Quantitative Real-time PCR,qRT-PCR)技术分析该基因在干旱胁迫下的表达特性。【结果】该基因编码一个分子式为C2675H4217N779O798S21,分子量为60 731.91,氨基酸大小为539 aa,等电点为6.44的亲水性蛋白。该蛋白无跨膜结构以及信号肽,预测结果显示该蛋白定位于细胞核且与10个蛋白存在互作,属于PK_like亚家族;该基因启动区含有大量的光响应和多种激素响应等元件。在不同含水量情况下,ZmCDPK22的表达量不同,与叶片含水量87%相比,其相对表达量随着叶片含水量的降低而逐渐降低,在叶片含水量为78%时相对表达量最高,在含水量为33%时相对表达量最低。【结论】该基因在叶片不同含水量的表达量不同,该基因响应干旱胁迫,可能在干旱应答反应中发挥一定功能。
中图分类号:
邵盘霞, 赵准, 邵武奎, 郝晓燕, 高升旗, 李建平, 胡文冉, 黄全生. 玉米ZmCDPK22基因在干旱胁迫下的表达分析[J]. 新疆农业科学, 2023, 60(6): 1372-1378.
SHAO Panxia, ZHAO Zhun, SHAO Wukui, HAO Xiaoyan, GAO Shengqi, LI Jianping, HU Wenran, HUANG Quansheng. Expression analysis of ZmCDPK22 gene in maize under drought stress[J]. Xinjiang Agricultural Sciences, 2023, 60(6): 1372-1378.
元件 Element | 数量 Number | 功能 Function | 元件 Element | 数量 Number | 功能 Function |
---|---|---|---|---|---|
TATA-box | 30 | 核心启动元件 | GT1-motif | 1 | 光响应元件 |
CAAT-box | 26 | 核心启动元件 | G-box | 1 | 光响应元件 |
STRE | 6 | unknown | DRE core | 1 | unknown |
MYC | 5 | unknown | AT-rich element | 1 | 富含AT的DNA蛋白结合位点 |
as-1 | 3 | unknown | A-box | 1 | 顺式作用调控元件 |
CGTCA-motif | 3 | 茉莉酸甲酯响应元件 | W box | 1 | unknown |
TGACG-motif | 3 | 茉莉酸甲酯响应元件 | CCGTCC motif | 1 | unknown |
ARE | 3 | 厌氧诱导元件 | TCT-motif | 1 | 光响应元件 |
ABRE | 2 | 脱落酸响应元件 | Box 4 | 1 | 参与光反应 |
ACE | 2 | 光响应元件 | G-Box | 1 | 光响应元件 |
AAGAA-motif | 2 | unknown | WUN-motif | 1 | unknown |
Sp1 | 2 | 光响应元件 | H-box | 1 | unknown |
AT~TATA-box | 2 | unknown | ERE | 1 | unknown |
LTR | 1 | 低温响应元件 | CAT-box | 1 | 分生组织表达元件 |
CCGTCC-box | 1 | unknown | WRE3 | 1 | unknown |
Myc | 1 | unknown |
表1 ZmCDPK22启动子顺式作用元件
Tab.1 Cis-acting elements in the promoter of ZmCDPK22
元件 Element | 数量 Number | 功能 Function | 元件 Element | 数量 Number | 功能 Function |
---|---|---|---|---|---|
TATA-box | 30 | 核心启动元件 | GT1-motif | 1 | 光响应元件 |
CAAT-box | 26 | 核心启动元件 | G-box | 1 | 光响应元件 |
STRE | 6 | unknown | DRE core | 1 | unknown |
MYC | 5 | unknown | AT-rich element | 1 | 富含AT的DNA蛋白结合位点 |
as-1 | 3 | unknown | A-box | 1 | 顺式作用调控元件 |
CGTCA-motif | 3 | 茉莉酸甲酯响应元件 | W box | 1 | unknown |
TGACG-motif | 3 | 茉莉酸甲酯响应元件 | CCGTCC motif | 1 | unknown |
ARE | 3 | 厌氧诱导元件 | TCT-motif | 1 | 光响应元件 |
ABRE | 2 | 脱落酸响应元件 | Box 4 | 1 | 参与光反应 |
ACE | 2 | 光响应元件 | G-Box | 1 | 光响应元件 |
AAGAA-motif | 2 | unknown | WUN-motif | 1 | unknown |
Sp1 | 2 | 光响应元件 | H-box | 1 | unknown |
AT~TATA-box | 2 | unknown | ERE | 1 | unknown |
LTR | 1 | 低温响应元件 | CAT-box | 1 | 分生组织表达元件 |
CCGTCC-box | 1 | unknown | WRE3 | 1 | unknown |
Myc | 1 | unknown |
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