新疆农业科学 ›› 2023, Vol. 60 ›› Issue (7): 1790-1797.DOI: 10.6048/j.issn.1001-4330.2023.07.027
陈乙煌1(), 邢利1, 东珍珍1, 马小梅1, 黄建军2, 罗晓霞1()
收稿日期:
2022-10-30
出版日期:
2023-07-20
发布日期:
2023-07-11
通信作者:
罗晓霞(1982-),女,重庆人,硕士生导师,研究方向为微生物次级代谢产物挖掘,(E-mail)xxluo415@163.com
作者简介:
陈乙煌(1998-),男,福建泉州人,研究生,研究方向为微生物次级代谢产物挖掘,(E-mail)375093055@qq.com
基金资助:
CHEN Yihuang1(), XING Li1, DONG Zhenzhen1, MA Xiaomei1, HUANG Jianjun2, LUO Xiaoxia1()
Received:
2022-10-30
Online:
2023-07-20
Published:
2023-07-11
Correspondence author:
LUO Xiaoxia(1982-), female, master supervisor, research direction:Mining of microbial secondary metabolites,(E-mail)xxluo415@163.com
Supported by:
摘要:
【目的】分析柽柳根际土壤放线菌物种多样性,研究其抗菌活性,为新疆主要农牧业病害的防控奠定菌种基础。【方法】选择新疆南疆地区10种柽柳根际土壤的放线菌资源,采用四种培养基,通过菌株16SrDNA测序,采用平板对峙法筛选抗菌活性。【结果】分离出294株菌株,鉴定的150株,分属于7个纲12个目16科24个属,另有9个潜在新种,以金黄色葡萄球菌、铜绿假单胞菌、大肠杆菌、肺炎克雷伯菌、解淀粉欧文氏菌、伤寒沙门氏菌、白色念珠菌、链格孢菌、棉花黄萎病菌、棉花枯萎病菌为靶标菌。【结论】筛选出68株活性放线菌。柽柳根际土壤放线菌的分离丰富了微生物资源及菌种的储备。
中图分类号:
陈乙煌, 邢利, 东珍珍, 马小梅, 黄建军, 罗晓霞. 柽柳根际土壤放线菌的分离及拮抗活性筛选[J]. 新疆农业科学, 2023, 60(7): 1790-1797.
CHEN Yihuang, XING Li, DONG Zhenzhen, MA Xiaomei, HUANG Jianjun, LUO Xiaoxia. Isolation and antagonistic activity screening of Actinomycetes from rhizosphere soil of Tamarix[J]. Xinjiang Agricultural Sciences, 2023, 60(7): 1790-1797.
土样编号 Soil sample number | 样品类型 Soil sample type | 取样位置 Sampling location | 纬度 Latitude (°) | 经度 Longitude (°) | 海拔 Altitude (m) |
---|---|---|---|---|---|
HT44 | 红柳根际土 | 塔中-民丰 | 38.412 | 83.205 | 1 164.9 |
HT51 | 红柳根际土 | 萨勒吾则克乡 | 37.254 | 83.018 | 1 386.6 |
HT53 | 红柳根际土 | 民丰-且末 | 37.688 | 83.959 | 1 341.1 |
HT57 | 红柳根际土 | 塔提让乡 | 38.485 | 85.824 | 1 112.1 |
HT61 | 红柳根际土 | 瓦石峡乡 | 38.819 | 87.743 | 885.2 |
HT65 | 红柳根际土 | 若羌-库尔勒 | 39.889 | 88.399 | 814.3 |
HT67 | 红柳根际土 | 大西海子水库 | 40.562 | 87.810 | 829.6 |
HT71 | 红柳根际土 | 沙雅 | 41.137 | 82.446 | 957.8 |
HT75 | 红柳根际土 | 二牧场-14团 | 40.660 | 81.943 | 975.1 |
HT49 | 红柳根际土 | 民丰-于田 | 36.888 | 82.553 | 1 664.8 |
表1 土壤样品信息
Tab.1 Soil sample information sheet
土样编号 Soil sample number | 样品类型 Soil sample type | 取样位置 Sampling location | 纬度 Latitude (°) | 经度 Longitude (°) | 海拔 Altitude (m) |
---|---|---|---|---|---|
HT44 | 红柳根际土 | 塔中-民丰 | 38.412 | 83.205 | 1 164.9 |
HT51 | 红柳根际土 | 萨勒吾则克乡 | 37.254 | 83.018 | 1 386.6 |
HT53 | 红柳根际土 | 民丰-且末 | 37.688 | 83.959 | 1 341.1 |
HT57 | 红柳根际土 | 塔提让乡 | 38.485 | 85.824 | 1 112.1 |
HT61 | 红柳根际土 | 瓦石峡乡 | 38.819 | 87.743 | 885.2 |
HT65 | 红柳根际土 | 若羌-库尔勒 | 39.889 | 88.399 | 814.3 |
HT67 | 红柳根际土 | 大西海子水库 | 40.562 | 87.810 | 829.6 |
HT71 | 红柳根际土 | 沙雅 | 41.137 | 82.446 | 957.8 |
HT75 | 红柳根际土 | 二牧场-14团 | 40.660 | 81.943 | 975.1 |
HT49 | 红柳根际土 | 民丰-于田 | 36.888 | 82.553 | 1 664.8 |
图1 柽柳根际土壤菌株的分离 注:A:不同土壤样品分离的菌株数量;B:不同培养基分离的菌株数量
Fig.1 Isolation of Tamarix ramosissima rhizosphere soil strains Note:Fig.1A:Number of strains isolated from different soil samples; Fig.1B:Number of strains isolated from different media
图2 柽柳根际土壤菌株的鉴定 注:A:16S rDNA电泳图 B:16S rDNA序列扩增电泳图(M:为maker,P为阳性,N为阴性)
Fig.2 Identification of strains in the rhizosphere soil of Tamarix ramosissima Note:A: Agarose gel electrophoresis of total DNA from samples.M: DNA marker trans 2K; 1 to 23: genomic DNAs of samples 1 to 23,respectively.B: Agarose gel electrophoresis of PCR from samples.M: DNA marker trans 2K; 1 to 22:PCR of samples 1 to 22,respectively.(M: maker P: positive control N: negative control)
序号 | 菌株编号 | 相似菌株 | 相似性(%) | 抑菌圈直径类型(mm) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S.a | P.a | E.c | K.p | E.a | S.t | C.a | A.t | V.d | F.o | ||||
1 | TRM 76131 | Cellulosimicrobium marinum RS-7-4 | 98.99 | — | — | + | — | + | + | ++ | — | +++ | + |
2 | TRM 76130 | Rhizobium tarimense PL-41 | 99.71 | ++ | — | + | — | — | + | +++ | +++ | ++ | |
3 | TRM 76129 | Salmonella enterica subsp.entericaL T2 | 99.23 | — | — | — | + | + | + | ++ | ++ | ++ | — |
4 | TRM 76146 | Rhizobium tarimense PL-41 | 99.05 | — | — | + | — | + | + | — | + | + | — |
5 | TRM 76147 | Microbacterium petrolearium LAM0410 | 98.56 | — | + | — | — | — | — | + | +++ | +++ | + |
6 | TRM 76156 | Rhizobium tarimense PL-41 | 98.84 | — | — | — | — | — | — | +++ | +++ | +++ | + |
7 | TRM 76174 | Neorhizobium alkalisol CCBAU 01393i | 98.84 | — | — | — | + | + | — | +++ | +++ | +++ | + |
8 | TRM 76175 | Rhizobium rosettiformans W3 | 99.06 | — | — | — | + | + | — | ++ | ++ | — | — |
9 | TRM 76101 | Pseudochrobactrum asaccharolyticum DSM 25619 | 99.18 | — | + | ++ | ++ | ++ | +++ | — | — | — | |
10 | TRM 76159 | Phyllobacterium myrsinacearum DSM 5892 | 99.41 | — | — | + | + | — | + | ++ | — | +++ | +++ |
11 | TRM 76062 | Bacillus rugosus SPB7 | 99.86 | — | — | — | + | + | + | — | — | — | — |
12 | TRM 76132 | Rhizobium tarimense PL-41 | 99.56 | — | + | — | — | — | — | + | +++ | ++ | ++ |
13 | TRM 76072 | Streptomyces tunisiensis CN-207 | 98.98 | ++ | +++ | — | — | — | — | — | — | — | — |
14 | TRM 76100 | Achromobacter marplatensis B2 | 99.71 | — | + | — | + | + | — | — | +++ | — | ++ |
15 | TRM 76153 | Bacillus cabrialesii TE3 | 99.79 | — | — | — | — | — | — | ++ | +++ | + | ++ |
表2 对不同病原菌有较强活性的部分菌株
Tab.2 Some strains with strong activity against different pathogens
序号 | 菌株编号 | 相似菌株 | 相似性(%) | 抑菌圈直径类型(mm) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S.a | P.a | E.c | K.p | E.a | S.t | C.a | A.t | V.d | F.o | ||||
1 | TRM 76131 | Cellulosimicrobium marinum RS-7-4 | 98.99 | — | — | + | — | + | + | ++ | — | +++ | + |
2 | TRM 76130 | Rhizobium tarimense PL-41 | 99.71 | ++ | — | + | — | — | + | +++ | +++ | ++ | |
3 | TRM 76129 | Salmonella enterica subsp.entericaL T2 | 99.23 | — | — | — | + | + | + | ++ | ++ | ++ | — |
4 | TRM 76146 | Rhizobium tarimense PL-41 | 99.05 | — | — | + | — | + | + | — | + | + | — |
5 | TRM 76147 | Microbacterium petrolearium LAM0410 | 98.56 | — | + | — | — | — | — | + | +++ | +++ | + |
6 | TRM 76156 | Rhizobium tarimense PL-41 | 98.84 | — | — | — | — | — | — | +++ | +++ | +++ | + |
7 | TRM 76174 | Neorhizobium alkalisol CCBAU 01393i | 98.84 | — | — | — | + | + | — | +++ | +++ | +++ | + |
8 | TRM 76175 | Rhizobium rosettiformans W3 | 99.06 | — | — | — | + | + | — | ++ | ++ | — | — |
9 | TRM 76101 | Pseudochrobactrum asaccharolyticum DSM 25619 | 99.18 | — | + | ++ | ++ | ++ | +++ | — | — | — | |
10 | TRM 76159 | Phyllobacterium myrsinacearum DSM 5892 | 99.41 | — | — | + | + | — | + | ++ | — | +++ | +++ |
11 | TRM 76062 | Bacillus rugosus SPB7 | 99.86 | — | — | — | + | + | + | — | — | — | — |
12 | TRM 76132 | Rhizobium tarimense PL-41 | 99.56 | — | + | — | — | — | — | + | +++ | ++ | ++ |
13 | TRM 76072 | Streptomyces tunisiensis CN-207 | 98.98 | ++ | +++ | — | — | — | — | — | — | — | — |
14 | TRM 76100 | Achromobacter marplatensis B2 | 99.71 | — | + | — | + | + | — | — | +++ | — | ++ |
15 | TRM 76153 | Bacillus cabrialesii TE3 | 99.79 | — | — | — | — | — | — | ++ | +++ | + | ++ |
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